Install¶
Requirements¶
- Roche 454 Analysis Software(gsAssembler, runProject)
- Everything should be bundled with the pipeline
Installation¶
- Clone repo
git clone https://github.com/VDBWRAIR/bactpipeline.git
- Enter code directory
cd bactpipeline
- Install python virtualenv
virtualenv env
. env/bin/activate
- Install bactpipeline
pip install -r requirements.txt
python setup.py install